Package: PGEhammer 0.1.0

Bob Verity

PGEhammer: What the Package Does (Title Case)

A series of utility functions that improve the experience of working with other software tools in Plasmodium genomic epidemiology. This includes functions for wrangling data and visualising outputs. Part of the PGEforge set of resources.

Authors:Bob Verity [aut, cre], Shazia Ruybal [aut]

PGEhammer_0.1.0.tar.gz
PGEhammer_0.1.0.zip(r-4.5)PGEhammer_0.1.0.zip(r-4.4)PGEhammer_0.1.0.zip(r-4.3)
PGEhammer_0.1.0.tgz(r-4.4-any)PGEhammer_0.1.0.tgz(r-4.3-any)
PGEhammer_0.1.0.tar.gz(r-4.5-noble)PGEhammer_0.1.0.tar.gz(r-4.4-noble)
PGEhammer_0.1.0.tgz(r-4.4-emscripten)PGEhammer_0.1.0.tgz(r-4.3-emscripten)
PGEhammer.pdf |PGEhammer.html
PGEhammer/json (API)

# Install 'PGEhammer' in R:
install.packages('PGEhammer', repos = c('https://plasmogenepi.r-universe.dev', 'https://cloud.r-project.org'))

Peer review:

Bug tracker:https://github.com/mrc-ide/pgehammer/issues

On CRAN:

1.70 score 3 scripts 2 exports 36 dependencies

Last updated 1 years agofrom:e7c46e3843. Checks:3 OK, 4 NOTE. Indexed: no.

TargetResultLatest binary
Doc / VignettesOKJan 07 2025
R-4.5-winNOTEJan 07 2025
R-4.5-linuxNOTEJan 07 2025
R-4.4-winNOTEJan 07 2025
R-4.4-macNOTEJan 07 2025
R-4.3-winOKJan 07 2025
R-4.3-macOKJan 07 2025

Exports:squarevcf2long

Dependencies:apecliclustercpp11digestdplyrfansigenericsgluelatticelifecyclemagrittrMASSMatrixmemusemgcvnlmepermutepillarpinfsc50pkgconfigpurrrR6Rcpprlangstringistringrtibbletidyrtidyselectutf8vcfRvctrsveganviridisLitewithr