Package: PGEhammer 0.1.0

Bob Verity

PGEhammer: What the Package Does (Title Case)

A series of utility functions that improve the experience of working with other software tools in Plasmodium genomic epidemiology. This includes functions for wrangling data and visualising outputs. Part of the PGEforge set of resources.

Authors:Bob Verity [aut, cre], Shazia Ruybal [aut]

PGEhammer_0.1.0.tar.gz
PGEhammer_0.1.0.zip(r-4.5)PGEhammer_0.1.0.zip(r-4.4)PGEhammer_0.1.0.zip(r-4.3)
PGEhammer_0.1.0.tgz(r-4.5-any)PGEhammer_0.1.0.tgz(r-4.4-any)PGEhammer_0.1.0.tgz(r-4.3-any)
PGEhammer_0.1.0.tar.gz(r-4.5-noble)PGEhammer_0.1.0.tar.gz(r-4.4-noble)
PGEhammer_0.1.0.tgz(r-4.4-emscripten)PGEhammer_0.1.0.tgz(r-4.3-emscripten)
PGEhammer.pdf |PGEhammer.html✨
PGEhammer/json (API)

# Install 'PGEhammer' in R:
install.packages('PGEhammer', repos = c('https://plasmogenepi.r-universe.dev', 'https://cloud.r-project.org'))

Bug tracker:https://github.com/mrc-ide/pgehammer/issues

On CRAN:

Conda-Forge:

1.70 score 3 scripts 2 exports 36 dependencies

Last updated 1 years agofrom:e7c46e3843. Checks:3 OK, 5 NOTE. Indexed: no.

TargetResultLatest binary
Doc / VignettesOKFeb 06 2025
R-4.5-winNOTEFeb 06 2025
R-4.5-macNOTEFeb 06 2025
R-4.5-linuxNOTEFeb 06 2025
R-4.4-winNOTEFeb 06 2025
R-4.4-macNOTEFeb 06 2025
R-4.3-winOKFeb 06 2025
R-4.3-macOKFeb 06 2025

Exports:squarevcf2long

Dependencies:apecliclustercpp11digestdplyrfansigenericsgluelatticelifecyclemagrittrMASSMatrixmemusemgcvnlmepermutepillarpinfsc50pkgconfigpurrrR6Rcpprlangstringistringrtibbletidyrtidyselectutf8vcfRvctrsveganviridisLitewithr