Package: PGEhammer 0.1.0

Bob Verity

PGEhammer: What the Package Does (Title Case)

A series of utility functions that improve the experience of working with other software tools in Plasmodium genomic epidemiology. This includes functions for wrangling data and visualising outputs. Part of the PGEforge set of resources.

Authors:Bob Verity [aut, cre], Shazia Ruybal [aut]

PGEhammer_0.1.0.tar.gz
PGEhammer_0.1.0.zip(r-4.5)PGEhammer_0.1.0.zip(r-4.4)PGEhammer_0.1.0.zip(r-4.3)
PGEhammer_0.1.0.tgz(r-4.4-any)PGEhammer_0.1.0.tgz(r-4.3-any)
PGEhammer_0.1.0.tar.gz(r-4.5-noble)PGEhammer_0.1.0.tar.gz(r-4.4-noble)
PGEhammer_0.1.0.tgz(r-4.4-emscripten)PGEhammer_0.1.0.tgz(r-4.3-emscripten)
PGEhammer.pdf |PGEhammer.html
PGEhammer/json (API)

# Install 'PGEhammer' in R:
install.packages('PGEhammer', repos = c('https://plasmogenepi.r-universe.dev', 'https://cloud.r-project.org'))

Peer review:

Bug tracker:https://github.com/mrc-ide/pgehammer/issues

On CRAN:

2.00 score 3 scripts 2 exports 36 dependencies

Last updated 11 months agofrom:e7c46e3843. Checks:OK: 3 NOTE: 4. Indexed: no.

TargetResultDate
Doc / VignettesOKNov 08 2024
R-4.5-winNOTENov 08 2024
R-4.5-linuxNOTENov 08 2024
R-4.4-winNOTENov 08 2024
R-4.4-macNOTENov 08 2024
R-4.3-winOKNov 08 2024
R-4.3-macOKNov 08 2024

Exports:squarevcf2long

Dependencies:apecliclustercpp11digestdplyrfansigenericsgluelatticelifecyclemagrittrMASSMatrixmemusemgcvnlmepermutepillarpinfsc50pkgconfigpurrrR6Rcpprlangstringistringrtibbletidyrtidyselectutf8vcfRvctrsveganviridisLitewithr