Package: variantstring 1.8.6

Bob Verity

variantstring: Functions for working with variant string format

Contains a series of functions for working with genetic information encoded in variant string format. Includes methods for comparing and manipulating strings.

Authors:Bob Verity [aut, cre]

variantstring_1.8.6.tar.gz
variantstring_1.8.6.zip(r-4.7)variantstring_1.8.6.zip(r-4.6)variantstring_1.8.6.zip(r-4.5)
variantstring_1.8.6.tgz(r-4.6-any)variantstring_1.8.6.tgz(r-4.5-any)
variantstring_1.8.6.tar.gz(r-4.7-any)variantstring_1.8.6.tar.gz(r-4.6-any)
variantstring_1.8.6.tgz(r-4.6-emscripten)
manual.pdf |manual.html✨
card.svg |card.png
variantstring/json (API)

# Install 'variantstring' in R:
install.packages('variantstring', repos = c('https://plasmogenepi.r-universe.dev', 'https://cloud.r-project.org'))

Bug tracker:https://github.com/mrc-ide/variantstring/issues

On CRAN:

Conda:

2.23 score 17 scripts 19 exports 20 dependencies

Last updated from:b6c78b52f0. Checks:9 OK. Indexed: no.

TargetResultTimeFilesSyslog
linux-devel-x86_64OK118
source / vignettesOK157
linux-release-x86_64OK119
macos-release-arm64OK129
macos-oldrel-arm64OK99
windows-develOK91
windows-releaseOK76
windows-oldrelOK69
wasm-releaseOK98

Exports:allowed_amino_acidscheck_position_stringcheck_variant_stringcompare_position_stringcompare_variant_stringcount_phased_hetscount_unphased_hetsdrop_read_countsextract_single_locus_variantsget_component_variantslong_to_positionlong_to_variantorder_position_stringorder_variant_stringoverlay_variantposition_from_variant_stringposition_to_longsubset_positionvariant_to_long

Dependencies:clicpp11dplyrgenericsgluelifecyclemagrittrpillarpkgconfigpurrrR6rlangstringistringrtibbletidyrtidyselectutf8vctrswithr