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# CITATION file created with {cffr} R package
# See also: https://docs.ropensci.org/cffr/
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cff-version: 1.2.0
message: 'To cite package "polySimIBD" in publications use:'
type: software
license: MIT
title: 'polySimIBD: Structured Wright Fisher Simulator for Malaria Genetics'
version: 1.1.0
identifiers:
- type: doi
  value: 10.32614/CRAN.package.polySimIBD
abstract: Unique features of the malaria life-cycle and transmission dynamics requires
  extensions of typical population genetic simulators. Using a spatial discrete-loci,
  discrete-time structured Wright Fisher framework, we simulate malaria population
  genetics forwards in time. Users are then able to capture the full Ancestral Recombination
  Graph.
authors:
- family-names: Brazeau
  given-names: Nick
  email: nbrazeau@med.unc.edu
- family-names: Verity
  given-names: Bob
  email: r.verity@imperial.ac.uk
preferred-citation:
  type: article
  title: The impact of antimalarial resistance on the genetic structure of Plasmodium
    falciparum in the DRC
  authors:
  - family-names: R
    given-names: Verity
  - family-names: O
    given-names: Aydemir
  - family-names: NF
    given-names: Brazeau
  - family-names: OJ
    given-names: Watson
  - family-names: NJ
    given-names: Hathaway
  - family-names: MK
    given-names: Mwandagalirwa
  - family-names: PW
    given-names: Marsh
  - family-names: K
    given-names: Thwai
  - family-names: T
    given-names: Fulton
  - family-names: M
    given-names: Denton
  - family-names: AP
    given-names: Morgan
  - family-names: JB
    given-names: Parr
  - family-names: PK
    given-names: Tumwebaze
  - family-names: M
    given-names: Conrad
  - family-names: PJ
    given-names: Rosenthal
  - family-names: DS
    given-names: Ishengoma
  - family-names: J
    given-names: Ngondi
  - family-names: J
    given-names: Gutman
  - family-names: M
    given-names: Mulenga
  - family-names: DE
    given-names: Norris
  - family-names: WJ
    given-names: Moss
  - family-names: BA
    given-names: Mensah
  - family-names: JL
    given-names: Myers-Hansen
  - family-names: A
    given-names: Ghansah
  - family-names: AK
    given-names: Tshefu
  - family-names: AC
    given-names: Ghani
  - family-names: SR
    given-names: Meshnick
  - family-names: JA
    given-names: Bailey
  - family-names: JJ
    given-names: Juliano
  journal: Nature Commununications
  year: '2020'
  volume: '11'
  issue: '1'
  url: https://pubmed.ncbi.nlm.nih.gov/32355199/
  start: '2107'
repository: https://plasmogenepi.r-universe.dev
repository-code: https://github.com/nickbrazeau/polySimIBD
commit: 3eb603e9de4900d90caff1a2fe5119e1dc6cca3d
url: https://github.com/nickbrazeau/polySimIBD
contact:
- family-names: Brazeau
  given-names: Nick
  email: nbrazeau@med.unc.edu