# --------------------------------------------
# CITATION file created with {cffr} R package
# See also: https://docs.ropensci.org/cffr/
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cff-version: 1.2.0
message: 'To cite package "moire" in publications use:'
type: software
license: GPL-3.0-or-later
title: 'moire: Multiplicity of Infection and Allele Frequency Recovery from Noisy
  Polyallelic Genetics Data'
version: 3.3.2
doi: 10.1101/2023.10.03.560769
abstract: A Markov Chain Monte Carlo (MCMC) based approach to Bayesian estimation
  of individual level multiplicity of infection, within host relatedness, and population
  allele frequencies from polyallelic genetic data.
authors:
- family-names: Murphy
  given-names: Maxwell
  email: murphy2122@berkeley.edu
  orcid: https://orcid.org/0000-0003-0332-4388
- family-names: Greenhouse
  given-names: Bryan
  email: bryan.greenhouse@ucsf.edu
  orcid: https://orcid.org/0000-0003-0287-9111
preferred-citation:
  type: article
  title: 'MOIRE: A software package for the estimation of allele frequencies and effective
    multiplicity of infection from polyallelic data'
  authors:
  - family-names: Murphy
    given-names: Maxwell
    email: murphy2122@berkeley.edu
    orcid: https://orcid.org/0000-0003-0332-4388
  - family-names: Greenhouse
    given-names: Bryan
    email: bryan.greenhouse@ucsf.edu
    orcid: https://orcid.org/0000-0003-0287-9111
  journal: bioRxiv
  year: '2023'
  doi: 10.1101/2023.10.03.560769
  start: 2023.10.03.560769
repository: https://plasmogenepi.r-universe.dev
repository-code: https://github.com/EPPIcenter/moire
url: https://eppicenter.github.io/moire/
contact:
- family-names: Murphy
  given-names: Maxwell
  email: murphy2122@berkeley.edu
  orcid: https://orcid.org/0000-0003-0332-4388
identifiers:
- type: url
  value: https://eppicenter.ucsf.edu/resources