Package: isoRelate
Title: Identity-by-Descent Inference of Haploid Recombining Organisms
Version: 0.1.0
Authors@R: person("Lyndal", "Henden", email = "lyndal_henden@hotmail.com", role = c("aut", "cre"))
Description: Pairwise identity by descent inference of haploid species
        using single nucleotide polymorphism data. isoRelate can detect
        IBD in the presence of multi-clonal infections and also
        provides a function for identifying loci under recent positive
        selection.
Depends: R (>= 3.2.1)
License: MIT + file LICENSE
LazyData: TRUE
RoxygenNote: 6.0.1.9000
LinkingTo: Rcpp
Imports: Rcpp (>= 0.12.5), data.table, doParallel, foreach, ggplot2 (>=
        2.1.0), igraph, intergraph, ggnetwork, grDevices, graphics,
        utils, stats
Suggests: knitr, rmarkdown
VignetteBuilder: knitr
Config/pak/sysreqs: libglpk-dev libxml2-dev
Repository: https://plasmogenepi.r-universe.dev
Date/Publication: 2018-03-19 05:48:43 UTC
RemoteUrl: https://github.com/bahlolab/isoRelate
RemoteRef: HEAD
RemoteSha: 109ee470f1d1e9e4cd131045c23eea7047cff649
NeedsCompilation: yes
Packaged: 2026-06-16 08:26:14 UTC; root
Author: Lyndal Henden [aut, cre]
Maintainer: Lyndal Henden <lyndal_henden@hotmail.com>