{
  "_id": "6a156b18acfb0bcc41d63952",
  "Package": "McCOILR",
  "Type": "Package",
  "Title": "Rcpp implementation of THE REAL McCOIL",
  "Version": "1.3.1",
  "Date": "2018-09-02",
  "Author": "OJ Watson",
  "Maintainer": "OJ Watson <o.watson15@imperial.ac.uk>",
  "Description": "Wrapper for THE REAL McCOIL in Rcpp. Becuase R is easieR.",
  "License": "MIT + file LICENSE",
  "VignetteBuilder": "knitr",
  "SystemRequirements": "C++11",
  "Encoding": "UTF-8",
  "Config/testthat/edition": "3",
  "RoxygenNote": "7.3.2",
  "Repository": "https://plasmogenepi.r-universe.dev",
  "Date/Publication": "2025-03-07 17:23:49 UTC",
  "RemoteUrl": "https://github.com/OJWatson/McCOILR",
  "RemoteRef": "HEAD",
  "RemoteSha": "5a0f6bbd375fe2321663974dd9e29de2497b3d20",
  "NeedsCompilation": "yes",
  "Packaged": {
    "Date": "2026-05-26 09:39:10 UTC",
    "User": "root"
  },
  "MD5sum": "b6ebdde287c12025344b8143a284b285",
  "_user": "plasmogenepi",
  "_type": "src",
  "_file": "McCOILR_1.3.1.tar.gz",
  "_fileid": "8a3ff11decba9065026bb65e65081ec898b13570f04cea50990c04c42f6ecfa1",
  "_filesize": 283016,
  "_sha256": "8a3ff11decba9065026bb65e65081ec898b13570f04cea50990c04c42f6ecfa1",
  "_created": "2026-05-26T09:39:10.000Z",
  "_published": "2026-05-26T09:42:48.150Z",
  "_distro": "noble",
  "_jobs": [
    {
      "job": 77847603962,
      "time": 129,
      "config": "linux-devel-arm64",
      "r": "4.7.0",
      "check": "NOTE",
      "artifact": "7213782687"
    },
    {
      "job": 77847604001,
      "time": 147,
      "config": "linux-devel-x86_64",
      "r": "4.7.0",
      "check": "NOTE",
      "artifact": "7213788559"
    },
    {
      "job": 77847603900,
      "time": 177,
      "config": "linux-release-arm64",
      "r": "4.6.0",
      "check": "NOTE",
      "artifact": "7213798344"
    },
    {
      "job": 77847603922,
      "time": 152,
      "config": "linux-release-x86_64",
      "r": "4.6.0",
      "check": "NOTE",
      "artifact": "7213789906"
    },
    {
      "job": 77847603930,
      "time": 95,
      "config": "macos-oldrel-arm64",
      "r": "4.5.3",
      "check": "NOTE",
      "artifact": "7213770510"
    },
    {
      "job": 77847603943,
      "time": 178,
      "config": "macos-oldrel-x86_64",
      "r": "4.5.3",
      "check": "NOTE",
      "artifact": "7213799287"
    },
    {
      "job": 77847603921,
      "time": 169,
      "config": "macos-release-arm64",
      "r": "4.6.0",
      "check": "NOTE",
      "artifact": "7213795787"
    },
    {
      "job": 77847603911,
      "time": 164,
      "config": "macos-release-x86_64",
      "r": "4.6.0",
      "check": "NOTE",
      "artifact": "7213793865"
    },
    {
      "job": 77846983925,
      "time": 227,
      "config": "source",
      "r": "4.6.0",
      "check": "OK",
      "artifact": "7213737231"
    },
    {
      "job": 77847603886,
      "time": 121,
      "config": "wasm-release",
      "r": "4.6.0",
      "check": "OK",
      "artifact": "7213779829"
    },
    {
      "job": 77847603864,
      "time": 122,
      "config": "windows-devel",
      "r": "4.7.0",
      "check": "NOTE",
      "artifact": "7213780118"
    },
    {
      "job": 77847603995,
      "time": 149,
      "config": "windows-oldrel",
      "r": "4.5.3",
      "check": "NOTE",
      "artifact": "7213789360"
    },
    {
      "job": 77847603952,
      "time": 128,
      "config": "windows-release",
      "r": "4.6.0",
      "check": "NOTE",
      "artifact": "7213782121"
    }
  ],
  "_buildurl": "https://github.com/r-universe/plasmogenepi/actions/runs/26444424303",
  "_status": "success",
  "_host": "GitHub-Actions",
  "_upstream": "https://github.com/OJWatson/McCOILR",
  "_commit": {
    "id": "5a0f6bbd375fe2321663974dd9e29de2497b3d20",
    "author": "OJWatson <o.watson15@imperial.ac.uk>",
    "committer": "OJWatson <o.watson15@imperial.ac.uk>",
    "message": "update totrigger all test\n",
    "time": 1741368229
  },
  "_maintainer": {
    "name": "OJ Watson",
    "email": "o.watson15@imperial.ac.uk",
    "login": "ojwatson",
    "description": "",
    "uuid": 15249565
  },
  "_registered": true,
  "_dependencies": [
    {
      "package": "R",
      "version": ">= 3.5",
      "role": "Depends"
    },
    {
      "package": "Rcpp",
      "role": "LinkingTo"
    },
    {
      "package": "Rcpp",
      "role": "Imports"
    },
    {
      "package": "magrittr",
      "role": "Imports"
    },
    {
      "package": "knitr",
      "role": "Suggests"
    },
    {
      "package": "devtools",
      "role": "Suggests"
    },
    {
      "package": "rmarkdown",
      "role": "Suggests"
    },
    {
      "package": "qpdf",
      "role": "Suggests"
    },
    {
      "package": "testthat",
      "version": ">= 3.0.0",
      "role": "Suggests"
    }
  ],
  "_owner": "ojwatson",
  "_selfowned": false,
  "_usedby": 0,
  "_updates": [],
  "_tags": [],
  "_stars": 1,
  "_contributors": [
    {
      "user": "ojwatson",
      "count": 64,
      "uuid": 15249565
    }
  ],
  "_userbio": {
    "uuid": 140542976,
    "type": "organization",
    "name": "PlasmoGenEpi",
    "description": "We are a network of scientists who have come together since 2018 to address challenges in malaria genomic epidemiology."
  },
  "_downloads": {
    "count": 0,
    "source": "https://cranlogs.r-pkg.org/downloads/total/last-month/McCOILR"
  },
  "_devurl": "https://github.com/ojwatson/mccoilr",
  "_searchresults": 10,
  "_topics": [
    "cpp"
  ],
  "_rbuild": "4.6.0",
  "_assets": [
    "extra/citation.cff",
    "extra/citation.html",
    "extra/citation.json",
    "extra/citation.txt",
    "extra/contents.json",
    "extra/McCOILR.html",
    "extra/NEWS.html",
    "extra/NEWS.txt",
    "extra/readme.html",
    "extra/readme.md",
    "manual.pdf"
  ],
  "_cranurl": false,
  "_exports": [
    "%>%",
    "McCOIL_categorical",
    "McCOIL_categorical_cpp",
    "McCOIL_proportional",
    "McCOIL_proportional_cpp"
  ],
  "_help": [
    {
      "page": "McCOIL_categorical",
      "title": "The Real McCOIL categorical method function",
      "topics": [
        "McCOIL_categorical"
      ]
    },
    {
      "page": "McCOIL_categorical_cpp",
      "title": "McCOIL_categorical_cpp",
      "topics": [
        "McCOIL_categorical_cpp"
      ]
    },
    {
      "page": "McCOIL_proportional",
      "title": "The Real McCOIL proportional method function",
      "topics": [
        "McCOIL_proportional"
      ]
    },
    {
      "page": "McCOIL_proportional_cpp",
      "title": "McCOIL_proportional_cpp",
      "topics": [
        "McCOIL_proportional_cpp"
      ]
    },
    {
      "page": "McCOILR",
      "title": "Wrapper for THE REAL McCOIL in Rcpp",
      "topics": [
        "McCOILR",
        "package-McCOILR"
      ]
    }
  ],
  "_readme": "https://github.com/OJWatson/McCOILR/raw/HEAD/README.md",
  "_rundeps": [
    "magrittr",
    "Rcpp"
  ],
  "_sysdeps": [
    {
      "shlib": "libstdc++",
      "package": "libstdc++6",
      "source": "gcc",
      "version": "14.2.0-4ubuntu2~24.04.1",
      "name": "c++",
      "homepage": "http://gcc.gnu.org/",
      "description": "GNU Standard C++ Library v3"
    }
  ],
  "_vignettes": [
    {
      "source": "introduction.Rmd",
      "filename": "introduction.html",
      "title": "The REAL McCOIL Rcpp package",
      "author": "OJ Watson",
      "engine": "knitr::rmarkdown",
      "headings": [
        "Overview",
        "1. Description of aims of package",
        "2. Testing Rcpp package"
      ],
      "created": "2021-10-12 11:13:20",
      "modified": "2021-10-12 11:13:20",
      "commits": 1
    }
  ],
  "_score": 2.6989700043360187,
  "_indexed": false,
  "_nocasepkg": "mccoilr",
  "_universes": [
    "plasmogenepi"
  ],
  "_binaries": [
    {
      "r": "4.7.0",
      "os": "linux",
      "version": "1.3.1",
      "date": "2026-05-26T09:41:22.000Z",
      "distro": "noble",
      "arch": "aarch64",
      "commit": "5a0f6bbd375fe2321663974dd9e29de2497b3d20",
      "fileid": "0b43fde655cf3211cce7f2ddea39e6db7bb6a081eebaa906a612246b6fe17f3c",
      "status": "success",
      "check": "NOTE",
      "buildurl": "https://github.com/r-universe/plasmogenepi/actions/runs/26444424303"
    },
    {
      "r": "4.7.0",
      "os": "linux",
      "version": "1.3.1",
      "date": "2026-05-26T09:41:34.000Z",
      "distro": "noble",
      "arch": "x86_64",
      "commit": "5a0f6bbd375fe2321663974dd9e29de2497b3d20",
      "fileid": "3faa606a6415452c6bd18f0a14096752a880bb31d71890a369be1807df3a4fab",
      "status": "success",
      "check": "NOTE",
      "buildurl": "https://github.com/r-universe/plasmogenepi/actions/runs/26444424303"
    },
    {
      "r": "4.6.0",
      "os": "linux",
      "version": "1.3.1",
      "date": "2026-05-26T09:42:08.000Z",
      "distro": "noble",
      "arch": "aarch64",
      "commit": "5a0f6bbd375fe2321663974dd9e29de2497b3d20",
      "fileid": "b3df57ff4d7ce2bbe50e136a798bed7bf92d1b79f7ec4f36c84ebb324b7c1e28",
      "status": "success",
      "check": "NOTE",
      "buildurl": "https://github.com/r-universe/plasmogenepi/actions/runs/26444424303"
    },
    {
      "r": "4.6.0",
      "os": "linux",
      "version": "1.3.1",
      "date": "2026-05-26T09:41:38.000Z",
      "distro": "noble",
      "arch": "x86_64",
      "commit": "5a0f6bbd375fe2321663974dd9e29de2497b3d20",
      "fileid": "56c1ac2cd9c64b9ff6184b16570e017823922c5b23631423ff93844969ab782e",
      "status": "success",
      "check": "NOTE",
      "buildurl": "https://github.com/r-universe/plasmogenepi/actions/runs/26444424303"
    },
    {
      "r": "4.5.3",
      "os": "mac",
      "version": "1.3.1",
      "date": "2026-05-26T09:40:49.000Z",
      "arch": "aarch64",
      "commit": "5a0f6bbd375fe2321663974dd9e29de2497b3d20",
      "fileid": "8e7fdf1f7ca2e7952a06e320f1c7e9af1cd7c97324c913c848b1fd40e280f896",
      "status": "success",
      "check": "NOTE",
      "buildurl": "https://github.com/r-universe/plasmogenepi/actions/runs/26444424303"
    },
    {
      "r": "4.5.3",
      "os": "mac",
      "version": "1.3.1",
      "date": "2026-05-26T09:41:54.000Z",
      "arch": "x86_64",
      "commit": "5a0f6bbd375fe2321663974dd9e29de2497b3d20",
      "fileid": "1fcd87aebe6b8b627b4eae0fd2356bebdde3fd4e834a6d9986e8bde4506fb41f",
      "status": "success",
      "check": "NOTE",
      "buildurl": "https://github.com/r-universe/plasmogenepi/actions/runs/26444424303"
    },
    {
      "r": "4.6.0",
      "os": "mac",
      "version": "1.3.1",
      "date": "2026-05-26T09:41:37.000Z",
      "arch": "aarch64",
      "commit": "5a0f6bbd375fe2321663974dd9e29de2497b3d20",
      "fileid": "60dc9f98bab39d1a6d199b20a4cab7f65e64f49404805b734414e4c1ff9b77b6",
      "status": "success",
      "check": "NOTE",
      "buildurl": "https://github.com/r-universe/plasmogenepi/actions/runs/26444424303"
    },
    {
      "r": "4.6.0",
      "os": "mac",
      "version": "1.3.1",
      "date": "2026-05-26T09:41:33.000Z",
      "arch": "x86_64",
      "commit": "5a0f6bbd375fe2321663974dd9e29de2497b3d20",
      "fileid": "0db26a8042c466811eaacb7a8615c17fd678ab863722e938c879a961f2df985a",
      "status": "success",
      "check": "NOTE",
      "buildurl": "https://github.com/r-universe/plasmogenepi/actions/runs/26444424303"
    },
    {
      "r": "4.6.0",
      "os": "wasm",
      "version": "1.3.1",
      "date": "2026-05-26T09:41:26.000Z",
      "arch": "emscripten",
      "commit": "5a0f6bbd375fe2321663974dd9e29de2497b3d20",
      "fileid": "fec451f4597ab98f6e304ae6d7d58885693ceea1468c553a83abe6dc99b4eff9",
      "status": "success",
      "buildurl": "https://github.com/r-universe/plasmogenepi/actions/runs/26444424303"
    },
    {
      "r": "4.7.0",
      "os": "win",
      "version": "1.3.1",
      "date": "2026-05-26T09:40:42.000Z",
      "arch": "x86_64",
      "commit": "5a0f6bbd375fe2321663974dd9e29de2497b3d20",
      "fileid": "e654e318993ec5af41455033b2e3c9f521e0c45de1340c131efe8013c369cfde",
      "status": "success",
      "check": "NOTE",
      "buildurl": "https://github.com/r-universe/plasmogenepi/actions/runs/26444424303"
    },
    {
      "r": "4.5.3",
      "os": "win",
      "version": "1.3.1",
      "date": "2026-05-26T09:40:55.000Z",
      "arch": "x86_64",
      "commit": "5a0f6bbd375fe2321663974dd9e29de2497b3d20",
      "fileid": "ee40f22ece9f35de194e650938e76ec674a6c0d7b0bee5109e21c7d88107ae4f",
      "status": "success",
      "check": "NOTE",
      "buildurl": "https://github.com/r-universe/plasmogenepi/actions/runs/26444424303"
    },
    {
      "r": "4.6.0",
      "os": "win",
      "version": "1.3.1",
      "date": "2026-05-26T09:40:46.000Z",
      "arch": "x86_64",
      "commit": "5a0f6bbd375fe2321663974dd9e29de2497b3d20",
      "fileid": "3458a63ce4c4a1ee5b20288130af21c62e1f688600b6a0fce71db7860ae11a21",
      "status": "success",
      "check": "NOTE",
      "buildurl": "https://github.com/r-universe/plasmogenepi/actions/runs/26444424303"
    }
  ]
}