--- title: "Installation" output: html_document vignette: > %\VignetteIndexEntry{Installation} %\VignetteEngine{knitr::knitr} %\VignetteEncoding{UTF-8} --- ## Installing Rcpp `MIPanalyzer` relies on the [Rcpp](https://cran.r-project.org/web/packages/Rcpp/index.html) package, which requires the following OS-specific steps: * Windows - Download and install the appropriate version of [Rtools](https://cran.rstudio.com/bin/windows/Rtools/) for your version of R. On installation, ensure you check the box to arrange your system PATH as recommended by Rtools * Mac OS X - Download and install [XCode](http://itunes.apple.com/us/app/xcode/id497799835?mt=12) - Within XCode go to Preferences : Downloads and install the Command Line Tools * Linux (Debian/Ubuntu) - Install the core software development utilities required for R package development as well as LaTeX by executing ```{} sudo apt-get install r-base-dev texlive-full ``` ## Installing and loading MIPanalyzer Next, in R, ensure that you have the [devtools](https://www.rstudio.com/products/rpackages/devtools/) package installed by running ```{r, eval = FALSE} install.packages("devtools", repos = 'http://cran.us.r-project.org') ``` Then install the `MIPanalyzer` package directly from GitHub by running ```{r, eval = FALSE} devtools::install_github("mrc-ide/MIPanalyzer", ref = "v1.1.0") ``` If you have any problems installing then please [raise an issue](https://github.com/mrc-ide/MIPanalyzer/issues) on github. Assuming everything installed correctly, we need to load the package: ```{r} library(MIPanalyzer) ``` You can test that the package is loaded and working by running the following command, which should produce this output: ```{r} check_MIPanalyzer_loaded() ```